6-Interpret

JackL’s PhD Defense - Modeling interactions with Deep Learning

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Ph.D. Dissertation Defense by Jack Lanchantin Tuesday, July 20th, 2021 at 2:00 PM (ET), via Zoom. Committee: Vicente Ordóñez Román, Committee Chair, ...

DrQi’s tutorial talk on “Make Deep Learning Interpretable for Sequential Data Analysis in Biomedicine” (Including our work on DeepChrome - AttentiveChrome - GCNChrome - DeepMotif - DeepVHPPI - MotifTransformer)

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I gave a tutorial talk at UVA-VADC Seminar Series 2021 and at monthly NIH Data Science Showcase seminar.

DrQi’s tutorial talk at UVA-CPHG seminar and healthDynamics workshop 2018 for Making Deep Learning Understandable for Genomics

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I gave a tutorial talk at UVA-CPHG Seminar Series 2018.

BCB- DrQ’s tutorial talk at ACM-BCB 2018 for Making Deep Learning Understandable for Genomics

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Here are the slides of tutorial talk I gave at ACM-BCB 2018.

Rita’s PhD Defense - Fast and Interpretable Classification of Sequential Data in Biology

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Ph.D. Dissertation Defense by Ritambhara Singh Monday, April 9, 2018 at 12:00PM in Rice 504.

DrQ Tutorial Talk about DeepChrome-AttentiveChrome-DeepMotif

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Here are the slides of lecture talks I gave at UCLA CGWI and NLM-CBB seminar about our deep learning tools: DeepChrome, AttentiveChrome and DeepMotif.

Best Paper Award for Deep Motif Dashboard

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Jack’s DeepMotif paper (Deep Motif Dashboard: Visualizing and Understanding Genomic Sequences Using Deep Neural Networks ) have received the “best paper awar...

NeurIPS - AttentiveChrome-Deep Attention Model to Understand Gene Regulation by Selective Attention on Chromatin

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Tool AttentiveChrome: Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chromatin

ICLR - Memory Matching Networks for Genomic Sequence Classification

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PSB - Deep Motif Dashboard- Visualizing and Understanding Genomic Sequences Using Deep Neural Networks

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Tool Deep Motif Dashboard: Visualizing and Understanding Genomic Sequences Using Deep Neural Networks